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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
4
DNase-seq
Assay category
20
DNA binding
4
DNA accessibility
Target of assay
16
histone
16
histone modification
8
broad histone mark
8
narrow histone mark
4
control
RNA binding protein
2
transcription factor
Date released
128
February, 2021
90
May, 2021
24
June, 2019
21
October, 2019
20
November, 2019
15
March, 2020
11
February, 2023
8
May, 2020
6
July, 2018
6
November, 2020
4
December, 2017
3
August, 2021
2
December, 2019
2
July, 2019
2
May, 2019
1
February, 2020
1
June, 2018
Available data
24
bam
20
bed narrowPeak
20
bigBed narrowPeak
20
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
23
primary cell
1
tissue
Organ
11
connective tissue
9
musculature of body
4
heart
3
epithelium
3
kidney
1
limb
1
vasculature
Project
24
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
24
AMP-T2D consortium
Audit category:
24
inconsistent ontology term
assay_slims!
3D chromatin structure
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle satellite cell
8
mesenchymal stem cell
7
cardiac fibroblast
3
1
epithelial cell of proximal tubule
2
1
smooth muscle cell of the brain vasculature
1
tissue
muscle of leg
1
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