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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
35
ATAC-seq
12
ChIP-seq
9
pCHi-C
6
MeRIP-seq
5
Hi-C
3
total RNA-seq
2
Capture-C
2
RRBS
2
single cell RNA-seq
1
STARR-seq
Assay category
35
DNA accessibility
Date released
16
May, 2021
8
February, 2023
7
November, 2019
4
October, 2019
Available data
15
bam
12
bed narrowPeak
bigWig
7
tsv
2
bed bed3+
1
bed bedgraph
1
txt
Organism
35
Homo sapiens
Biosample type
17
cell line
9
in vitro differentiated cells
8
primary cell
1
tissue
Organ
18
epithelium
17
pancreas
3
connective tissue
1
adipose tissue
1
liver
Project
35
AMP
Genome assembly (visualization)
13
hg19
11
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
35
inconsistent ontology term
1
inconsistent replicate
files.file_type!
bigWig
BIOSAMPLE
ASSAY
35 results
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ATAC-seq
cell line
EndoC_BH1
17
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
immature adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
tissue
adipose tissue(adipose white tissue)
1
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