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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Assay category
130
Transcription
Date released
128
February, 2021
69
May, 2021
5
October, 2019
4
March, 2020
4
May, 2020
2
February, 2023
1
February, 2020
1
November, 2019
Available data
128
tsv
127
bam
127
bigWig
84
txt
Organism
214
Homo sapiens
Biosample type
89
in vitro differentiated cells
85
tissue
36
cell line
4
primary cell
Organ
84
bone element
34
epithelium
33
pancreas
3
kidney
2
connective tissue
2
embryo
1
brain
Project
208
AMP
6
T1D
Genome assembly (visualization)
127
GRCh38
127
hg19
Lab
210
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
214
inconsistent ontology term
2
audit script error
BIOSAMPLE
ASSAY
214 results
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total RNA-seq
RNA microarray
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
cardiomyocytes (cardiac muscle cell)
3
immature adipocyte
2
intermediate cardiomyocytes
1
+ See 5 more…
tissue
bone element
84
cerebellum (Hemisphere)
1
cell line
EndoC_BH1
33
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
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