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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
RNA microarray
34
ChIP-seq
22
ATAC-seq
9
pCHi-C
8
single cell RNA-seq
4
Hi-C
3
DNase-seq
1
RRBS
1
STARR-seq
Assay category
96
Transcription
Date released
64
May, 2021
18
February, 2021
5
October, 2019
4
May, 2020
2
February, 2023
2
March, 2020
1
February, 2020
Available data
94
tsv
93
bam
93
bigWig
Organism
96
Homo sapiens
Biosample type
88
in vitro differentiated cells
4
primary cell
3
cell line
1
tissue
Organ
epithelium
33
pancreas
3
kidney
2
connective tissue
2
embryo
1
brain
Project
92
AMP
4
T1D
Genome assembly (visualization)
93
GRCh38
93
hg19
Lab
92
AMP-T2D consortium
4
Kyle Gaulton, UCSD
Audit category:
96
inconsistent ontology term
organ_slims!
epithelium
BIOSAMPLE
ASSAY
96 results
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total RNA-seq
in vitro differentiated cells
cardiomyocytes
59
cardiac precursors (cardiac muscle cell)
19
cardiomyocytes (cardiac muscle cell)
3
immature adipocyte
2
intermediate cardiomyocytes
1
+ See 4 more…
primary cell
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
cell line
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
tissue
cerebellum (Hemisphere)
1
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