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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
3
total RNA-seq
1
DNase-seq
Assay category
11
DNA binding
3
Transcription
1
DNA accessibility
Target of assay
9
transcription factor
7
recombinant protein
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
10
October, 2019
3
June, 2019
2
May, 2019
Available data
15
bam
15
bigWig
12
bed narrowPeak
5
bigBed narrowPeak
3
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
15
Homo sapiens
Biosample type
10
cell line
5
primary cell
Organ
57
epithelium
52
pancreas
15
kidney
11
connective tissue
8
musculature of body
4
embryo
4
heart
2
brain
1
adipose tissue
1
limb
1
liver
1
vasculature
Project
15
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
inconsistent ontology term
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
total RNA-seq
DNase-seq
cell line
RCC 7860 HIF1a re-expression
3
1
RCC 7860 HIF2a over-expression
2
1
RCC 7860 vector
2
1
primary cell
epithelial cell of proximal tubule
2
1
kidney epithelial cell
2
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