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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
total RNA-seq
ChIP-seq
3
ATAC-seq
1
Hi-C
Assay category
36
Transcription
3
DNA accessibility
1
3D chromatin structure
Date released
26
February, 2021
4
March, 2020
4
May, 2021
3
November, 2019
3
October, 2019
Available data
38
bigWig
37
bam
37
tsv
1
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
40
Homo sapiens
Biosample type
103
in vitro differentiated cells
40
cell line
22
primary cell
2
tissue
Organ
37
epithelium
37
pancreas
3
kidney
Project
38
AMP
2
T1D
Genome assembly (visualization)
40
hg19
37
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
40
inconsistent ontology term
1
inconsistent replicate
assay_title!
ChIP-seq
BIOSAMPLE
ASSAY
40 results
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total RNA-seq
ATAC-seq
Hi-C
cell line
EndoC_BH1
33
3
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
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