Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
total RNA-seq
2
ATAC-seq
1
Hi-C
Assay category
36
Transcription
2
DNA accessibility
1
3D chromatin structure
Date released
26
February, 2021
4
March, 2020
4
May, 2021
3
October, 2019
2
November, 2019
Available data
58
bigWig
57
bam
37
tsv
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
39
Homo sapiens
Biosample type
95
in vitro differentiated cells
39
cell line
17
primary cell
Organ
36
epithelium
36
pancreas
3
kidney
Project
37
AMP
2
T1D
Genome assembly (visualization)
39
hg19
36
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
39
inconsistent ontology term
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
39 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
Hi-C
cell line
EndoC_BH1
33
2
1
RCC 7860 HIF1a re-expression
1
RCC 7860 HIF2a over-expression
1
RCC 7860 vector
1
See all biosamples
Download