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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
7
ATAC-seq
1
Hi-C
1
total RNA-seq
Assay category
11
DNA binding
7
DNA accessibility
1
3D chromatin structure
1
Transcription
Target of assay
10
histone
10
histone modification
6
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
73
May, 2021
44
February, 2021
22
June, 2019
20
November, 2019
20
October, 2019
11
March, 2020
8
May, 2020
6
July, 2018
3
February, 2023
2
December, 2017
2
July, 2019
2
May, 2019
1
June, 2018
Available data
19
bam
18
bed narrowPeak
12
bigWig
1
bedpe bed3+
1
hic
1
tsv
Organism
20
Homo sapiens
Biosample type
14
cell line
5
in vitro differentiated cells
1
tissue
Organ
14
epithelium
14
pancreas
1
adipose tissue
1
connective tissue
Project
20
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
20
inconsistent ontology term
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
total RNA-seq
cell line
EndoC_BH1
11
1
1
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
tissue
adipose tissue(adipose white tissue)
1
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