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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
RRBS
Assay category
9
DNA binding
4
DNA accessibility
1
DNA methylation
Target of assay
8
histone
8
histone modification
4
broad histone mark
4
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
10
June, 2019
2
February, 2023
1
July, 2019
1
November, 2019
Available data
11
bam
11
bed narrowPeak
10
bigBed narrowPeak
10
bigWig
3
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
14
Homo sapiens
Biosample type
11
primary cell
2
in vitro differentiated cells
1
tissue
Organ
61
epithelium
55
pancreas
16
kidney
14
connective tissue
8
musculature of body
5
heart
4
embryo
2
brain
1
adipose tissue
1
limb
1
liver
vasculature
Project
14
AMP
Genome assembly (visualization)
14
hg19
11
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
14
inconsistent ontology term
organ_slims!
vasculature
BIOSAMPLE
ASSAY
14 results
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ChIP-seq
ATAC-seq
DNase-seq
RRBS
primary cell
mesenchymal stem cell
6
cardiac fibroblast
3
1
1
in vitro differentiated cells
immature adipocyte
2
tissue
adipose tissue(adipose white tissue)
1
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