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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ATAC-seq
4
DNase-seq
Assay category
52
DNA binding
48
Transcription
36
DNA accessibility
2
DNA methylation
1
3D chromatin structure
Date released
16
May, 2021
6
February, 2023
4
June, 2019
4
May, 2020
2
March, 2020
2
November, 2019
2
October, 2019
Available data
12
bam
10
bigWig
8
bed narrowPeak
7
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
bigBed narrowPeak
Organism
36
Homo sapiens
Biosample type
19
cell line
15
primary cell
in vitro differentiated cells
2
tissue
Organ
21
epithelium
19
pancreas
2
connective tissue
1
adipose tissue
1
heart
1
kidney
1
limb
1
liver
1
musculature of body
1
vasculature
Project
36
AMP
Genome assembly (visualization)
14
hg19
8
GRCh38
Lab
36
AMP-T2D consortium
Audit category:
36
inconsistent ontology term
29
audit script error
1
inconsistent replicate
biosample_type!
in vitro differentiated cells
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
DNase-seq
cell line
EndoC_BH1
19
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
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tissue
adipose tissue(adipose white tissue)
1
muscle of leg
1
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