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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
36
total RNA-seq
25
ChIP-seq
1
ATAC-seq
Assay category
36
Transcription
25
DNA binding
1
DNA accessibility
Target of assay
12
histone
12
histone modification
8
transcription factor
7
recombinant protein
6
broad histone mark
6
narrow histone mark
5
control
1
RNA binding protein
Date released
26
February, 2021
15
November, 2019
13
October, 2019
5
May, 2021
3
March, 2020
Available data
62
bam
58
bigWig
39
tsv
21
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
62
Homo sapiens
Biosample type
101
in vitro differentiated cells
62
cell line
45
primary cell
4
tissue
Organ
49
epithelium
49
pancreas
13
kidney
Project
58
AMP
4
T1D
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
62
AMP-T2D consortium
Audit category:
62
inconsistent ontology term
1
inconsistent control
1
inconsistent replicate
BIOSAMPLE
ASSAY
62 results
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total RNA-seq
ChIP-seq
ATAC-seq
cell line
EndoC_BH1
33
15
1
RCC 7860 HIF1a re-expression
1
4
RCC 7860 HIF2a over-expression
1
3
RCC 7860 vector
1
3
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