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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
pCHi-C
total RNA-seq
2
ATAC-seq
2
Hi-C
1
ChIP-seq
Assay category
2
3D chromatin structure
2
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
84
February, 2021
26
June, 2019
21
May, 2021
21
November, 2019
18
October, 2019
13
March, 2020
9
February, 2023
6
July, 2018
6
November, 2020
4
December, 2017
4
May, 2020
3
August, 2021
3
May, 2019
2
December, 2019
2
July, 2019
1
June, 2018
Available data
7
tsv
4
bedpe bed3+
3
bigWig
2
hic
2
ibed
1
bam
1
bed narrowPeak
Organism
13
Homo sapiens
Biosample type
5
cell line
5
in vitro differentiated cells
2
tissue
1
stem cell
Organ
3
epithelium
3
pancreas
2
kidney
1
connective tissue
1
stomach
1
urinary bladder
Project
12
AMP
1
T1D
Genome assembly (visualization)
7
hg19
1
GRCh38
Lab
13
AMP-T2D consortium
Audit category:
13
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
13 results
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Clear Filters
pCHi-C
ATAC-seq
Hi-C
ChIP-seq
cell line
EndoC_BH1
2
1
RCC 7860 VHL
1
RCC 7860 vector
1
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
1
lymphocyte of B lineage (iPSC)
1
1
tissue
bladder (urinary bladder)
1
gastric (mucosa of stomach)
1
stem cell
mesenchymal stem cell
1
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