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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
ChIP-seq
3
total RNA-seq
2
pCHi-C
1
STARR-seq
Assay category
10
DNA binding
3
Transcription
Target of assay
7
recombinant protein
7
transcription factor
3
control
Date released
13
October, 2019
2
March, 2020
1
August, 2021
Available data
13
bam
10
bigWig
7
bed narrowPeak
5
tsv
Organism
16
Homo sapiens
Biosample type
110
in vitro differentiated cells
91
tissue
44
primary cell
16
cell line
1
stem cell
Organ
epithelium
76
pancreas
15
kidney
Project
16
AMP
Genome assembly (visualization)
10
GRCh38
10
hg19
Lab
15
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
16
inconsistent ontology term
1
inconsistent control
1
inconsistent replicate
organ_slims!
epithelium
BIOSAMPLE
ASSAY
16 results
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ChIP-seq
total RNA-seq
pCHi-C
STARR-seq
cell line
RCC 7860 HIF1a re-expression
4
1
RCC 7860 vector
3
1
1
RCC 7860 HIF2a over-expression
3
1
RCC 7860 VHL
1
Synthesized DNA
1
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