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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
130
total RNA-seq
84
RNA microarray
59
ChIP-seq
42
ATAC-seq
9
pCHi-C
9
single cell RNA-seq
6
MeRIP-seq
5
Hi-C
4
DNase-seq
2
Capture-C
2
RRBS
1
STARR-seq
Assay category
42
DNA accessibility
Date released
16
May, 2021
9
February, 2023
7
November, 2019
4
May, 2020
4
October, 2019
2
March, 2020
Available data
15
bam
12
bed narrowPeak
7
bigWig
7
tsv
2
bed bed3+
1
bed bedgraph
1
txt
Organism
42
Homo sapiens
Biosample type
19
cell line
12
primary cell
10
in vitro differentiated cells
1
tissue
Organ
20
epithelium
19
pancreas
3
connective tissue
1
adipose tissue
1
liver
Project
42
AMP
Genome assembly (visualization)
20
hg19
11
GRCh38
Lab
41
AMP-T2D consortium
1
Struan F.A. Grant, CHOP
Audit category:
42
inconsistent ontology term
1
inconsistent replicate
BIOSAMPLE
ASSAY
42 results
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ATAC-seq
cell line
EndoC_BH1
19
primary cell
gabaergic neuron
3
microglial cell/astrocyte
3
central memory CD8-positive, alpha-beta T cell
2
naive B cel
2
Heart fetal (cardiac muscle cell)
1
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in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
immature adipocyte
2
cardiac precursors (cardiac muscle cell)
1
cardiomyocytes (cardiac muscle cell)
1
neuron cell of Hypothalamus (neuron)
1
tissue
adipose tissue(adipose white tissue)
1
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