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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
32
histone
32
histone modification
18
narrow histone mark
control
14
broad histone mark
14
transcription factor
7
recombinant protein
4
RNA binding protein
3
nucleotide modification
Date released
16
June, 2019
10
November, 2019
2
October, 2019
1
December, 2017
1
March, 2020
1
May, 2019
1
May, 2021
Available data
32
bam
32
bed narrowPeak
32
bigWig
17
bigBed narrowPeak
1
fastq
Organism
32
Homo sapiens
Biosample type
17
primary cell
12
cell line
2
tissue
1
in vitro differentiated cells
Organ
15
epithelium
12
pancreas
8
connective tissue
7
musculature of body
2
brain
2
heart
2
kidney
1
embryo
Project
30
AMP
2
T1D
Genome assembly (visualization)
32
GRCh38
32
hg19
Lab
32
AMP-T2D consortium
Audit category:
32
inconsistent ontology term
Audit category:
inconsistent control read length
target.investigated_as!
control
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
primary cell
skeletal muscle satellite cell
7
mesenchymal stem cell
6
cardiac fibroblast
2
epithelial cell of proximal tubule
1
kidney epithelial cell
1
cell line
EndoC_BH1
12
tissue
brodmann area 43
1
insular gyrus
1
in vitro differentiated cells
Hepatic endoderm
1
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