Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
3
total RNA-seq
2
pCHi-C
1
DNase-seq
1
RRBS
Assay category
11
DNA binding
3
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
9
transcription factor
7
recombinant protein
control
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
Date released
10
October, 2019
3
June, 2019
2
March, 2020
2
May, 2019
1
July, 2019
Available data
15
bam
15
bigWig
12
bed narrowPeak
5
bigBed narrowPeak
5
tsv
1
bed bed3+
1
bed bedMethyl
1
bed broadPeak
1
bigBed bedMethyl
1
bigBed broadPeak
Organism
18
Homo sapiens
Biosample type
12
cell line
6
primary cell
Organ
84
bone element
82
epithelium
76
pancreas
18
kidney
17
connective tissue
8
musculature of body
5
heart
4
embryo
3
brain
1
adipose tissue
1
limb
1
liver
1
stomach
1
urinary bladder
1
vasculature
Project
18
AMP
Genome assembly (visualization)
16
hg19
15
GRCh38
Lab
18
AMP-T2D consortium
Audit category:
18
inconsistent ontology term
7
audit script error
target.investigated_as!
control
BIOSAMPLE
ASSAY
18 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
pCHi-C
DNase-seq
RRBS
cell line
RCC 7860 HIF1a re-expression
3
1
RCC 7860 vector
2
1
1
RCC 7860 HIF2a over-expression
2
1
RCC 7860 VHL
1
primary cell
epithelial cell of proximal tubule
2
1
1
kidney epithelial cell
2
Download