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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
ChIP-seq
Assay category
42
DNA binding
Target of assay
42
transcription factor
33
histone
33
histone modification
19
narrow histone mark
15
control
14
broad histone mark
7
recombinant protein
4
RNA binding protein
3
chromatin remodeller
3
nucleotide modification
Date released
27
December, 2017
7
October, 2019
3
May, 2021
2
June, 2019
1
December, 2018
1
May, 2019
1
November, 2019
Available data
42
bam
42
bed narrowPeak
42
bigWig
31
bigBed narrowPeak
28
fastq
3
tagAlign
Organism
42
Homo sapiens
Biosample type
27
tissue
9
cell line
3
in vitro differentiated cells
3
primary cell
Organ
27
liver
9
kidney
3
epithelium
1
blood
1
bodily fluid
1
connective tissue
1
heart
1
pancreas
Project
42
AMP
Genome assembly (visualization)
42
GRCh38
42
hg19
Lab
42
AMP-T2D consortium
Audit category:
28
inconsistent control
14
inconsistent ontology term
BIOSAMPLE
ASSAY
42 results
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ChIP-seq
tissue
liver
27
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
EndoC_BH1
1
GM12878
1
in vitro differentiated cells
cardiomyocytes
3
primary cell
cardiac fibroblast
1
epithelial cell of proximal tubule
1
kidney epithelial cell
1
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