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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ATAC-seq
4
Hi-C
1
MPRA
Assay category
4
3D chromatin structure
4
DNA accessibility
Date released
688
February, 2021
399
May, 2021
396
November, 2017
372
August, 2017
341
May, 2020
314
October, 2019
313
August, 2021
218
June, 2019
203
February, 2023
178
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
93
December, 2017
85
November, 2018
80
April, 2019
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
October, 2017
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
9
April, 2020
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
Available data
4
hic
3
bedpe bed3+
3
cool
1
bam
1
bed broadPeak
1
bedpe
1
fastq
1
txt
Organism
8
Homo sapiens
Biosample type
5
tissue
3
primary cell
1
cell line
Organ
8
pancreas
3
epithelium
Project
6
AMP
3
HPAP
Genome assembly (visualization)
6
hg19
2
GRCh38
Lab
3
Klaus Kaestner, Upenn
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
AMP-T2D consortium
1
Maike Sander, UCSD
Audit category:
3
audit script error
audit.NOT_COMPLIANT.category!
missing controlled_by
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
9 results
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Clear Filters
ATAC-seq
Hi-C
MPRA
tissue
islet of Langerhans
4
1
primary cell
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
cell line
MIN6
1
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