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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
Assay category
293
DNA binding
Target of assay
598
histone modification
597
histone
412
transcription factor
303
narrow histone mark
293
broad histone mark
89
RNA binding protein
88
recombinant protein
29
chromatin remodeller
9
control
5
other context
5
other post-translational modification
Date released
56
May, 2019
45
November, 2017
42
October, 2019
37
April, 2019
32
August, 2017
20
May, 2024
19
October, 2018
15
December, 2017
8
February, 2018
6
August, 2021
6
November, 2019
4
January, 2019
3
October, 2017
Available data
293
bed narrowPeak
292
bigWig
273
bam
219
bigBed narrowPeak
80
fastq
49
tagAlign
14
bed broadPeak
10
bed bed3+
7
bigBed broadPeak
Organism
289
Homo sapiens
Biosample type
239
tissue
primary cell
37
in vitro differentiated cells
16
cell line
1
stem cell
Organ
59
brain
57
heart
41
pancreas
36
blood vessel
36
vasculature
34
limb
27
liver
16
nerve
14
artery
13
epithelium
12
connective tissue
10
kidney
4
embryo
4
musculature of body
4
spleen
Project
293
AMP
Genome assembly (visualization)
293
GRCh38
250
hg19
Lab
273
AMP-T2D consortium
20
Patrick T. Ellinor, Broad
Audit category:
6
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
14
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
biosample_type!
primary cell
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
tissue
left cardiac atrium
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
body of pancreas
11
+ See 24 more…
in vitro differentiated cells
adipocyte
12
hepatocyte
7
neural progenitor cell
6
pancreatic endoderm
4
definitive endodermal cell
2
+ See 5 more…
cell line
HepG2
7
EndoC_BH1
6
Panc1
3
stem cell
hESC
1
See all biosamples
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