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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
Assay category
47
DNA binding
Target of assay
88
histone
88
histone modification
47
broad histone mark
41
narrow histone mark
13
transcription factor
8
RNA binding protein
2
control
Date released
19
August, 2017
19
October, 2018
6
November, 2019
3
October, 2019
Available data
47
bam
47
bed narrowPeak
47
bigWig
30
bigBed narrowPeak
30
fastq
5
bed bed3+
4
bed broadPeak
4
tagAlign
Organism
43
Homo sapiens
Biosample type
32
tissue
9
cell line
6
primary cell
Organ
59
brain
57
heart
47
pancreas
41
blood vessel
41
vasculature
34
limb
30
epithelium
28
liver
16
connective tissue
16
nerve
15
kidney
14
artery
8
musculature of body
5
vein
4
embryo
4
spleen
Project
47
AMP
Genome assembly (visualization)
51
hg19
47
GRCh38
Lab
47
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
47 results
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Clear Filters
ChIP-seq
tissue
body of pancreas
11
endocrine pancreas
8
pancreas
8
islet of Langerhans
5
cell line
EndoC_BH1
6
Panc1
3
primary cell
pancreatic alpha cell
3
pancreatic beta cell
3
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