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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
ChIP-seq
Assay category
8
DNA binding
Target of assay
305
control
146
histone
146
histone modification
73
broad histone mark
73
narrow histone mark
17
transcription factor
8
RNA binding protein
2
nucleotide modification
Date released
5
May, 2021
2
November, 2017
1
April, 2019
Available data
99
bed narrowPeak
bigWig
96
bam
88
bigBed narrowPeak
86
fastq
9
bed broadPeak
9
bigBed broadPeak
1
bed bed3+
1
tar
Organism
8
Homo sapiens
Biosample type
5
in vitro differentiated cells
2
cell line
1
tissue
Organ
2
liver
1
kidney
Project
8
AMP
Lab
5
Kyle Gaulton, UCSD
3
AMP-T2D consortium
audit.NOT_COMPLIANT.category!
missing controlled_by
audit.ERROR.category!
inconsistent ontology term
files.file_type!
bigWig
BIOSAMPLE
ASSAY
8 results
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ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
cell line
HepG2
2
tissue
kidney
1
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