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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
303
ChIP-seq
Assay category
303
DNA binding
Target of assay
227
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
33
RNA binding protein
28
narrow histone mark
11
chromatin remodeller
2
other context
2
other post-translational modification
Date released
303
November, 2017
210
June, 2019
189
October, 2019
141
August, 2017
106
August, 2021
97
May, 2019
72
December, 2017
71
November, 2018
65
April, 2019
65
February, 2023
48
May, 2021
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
14
September, 2018
9
October, 2017
7
July, 2019
5
September, 2017
2
November, 2020
Available data
382
bam
324
bigWig
314
fastq
303
bed narrowPeak
302
bigBed narrowPeak
78
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
303
Homo sapiens
Biosample type
239
cell line
58
tissue
6
primary cell
Organ
239
liver
64
brain
4
epithelium
4
vasculature
2
blood vessel
Project
303
AMP
Genome assembly (visualization)
277
GRCh38
249
hg19
Lab
303
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
16
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
303 results
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Clear Filters
ChIP-seq
cell line
HepG2
239
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
7
+ See 1 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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