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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
103
histone
103
histone modification
52
broad histone mark
50
narrow histone mark
38
transcription factor
32
control
11
RNA binding protein
3
chromatin remodeller
Date released
8
February, 2018
7
August, 2017
7
August, 2021
6
May, 2021
4
December, 2017
Available data
30
bam
22
fastq
10
tagAlign
bed bed3+
Organism
32
Homo sapiens
Biosample type
184
tissue
83
cell line
35
primary cell
32
in vitro differentiated cells
Organ
7
connective tissue
6
embryo
4
epithelium
1
liver
1
pancreas
Project
32
AMP
Lab
27
AMP-T2D consortium
5
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
audit.NOT_COMPLIANT.category!
missing controlled_by
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
in vitro differentiated cells
adipocyte
7
neural progenitor cell
7
embryonic stem cell
6
pancreatic endoderm
4
Hepatic endoderm
2
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