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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
2
total RNA-seq
Assay category
22
DNA binding
2
Transcription
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
4
control
3
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
19
December, 2017
5
May, 2021
Available data
24
bam
20
bigWig
19
fastq
18
bed narrowPeak
14
bigBed narrowPeak
3
tagAlign
2
tsv
Organism
24
Homo sapiens
Biosample type
385
primary cell
79
cell line
24
in vitro differentiated cells
15
tissue
Organ
92
connective tissue
28
embryo
24
epithelium
15
liver
3
pancreas
1
adipose tissue
1
heart
Project
24
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
24
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
24 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
15
Hepatic endoderm
4
pancreatic PP cell
3
endothelial cell
1
intermediate endothelial cell
1
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