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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
279
ChIP-seq
Assay category
279
DNA binding
Target of assay
585
histone modification
584
histone
305
narrow histone mark
279
broad histone mark
187
control
71
transcription factor
22
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
72
August, 2017
56
May, 2019
42
November, 2017
39
October, 2019
37
April, 2019
19
October, 2018
7
October, 2017
4
January, 2019
3
December, 2017
Available data
231
bed narrowPeak
230
bigWig
219
bam
202
bigBed narrowPeak
73
tagAlign
41
fastq
19
bed broadPeak
5
bed bed3+
Organism
275
Homo sapiens
Biosample type
279
tissue
101
primary cell
56
in vitro differentiated cells
19
cell line
1
stem cell
Organ
67
brain
40
pancreas
37
heart
36
blood vessel
36
vasculature
34
limb
25
liver
20
adipose tissue
20
connective tissue
16
musculature of body
16
nerve
14
artery
10
kidney
4
spleen
Project
279
AMP
Genome assembly (visualization)
219
GRCh38
195
hg19
Lab
279
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
279 results
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ChIP-seq
tissue
liver
22
subcutaneous abdominal adipose tissue
20
tibial nerve
16
heart left ventricle
15
tibial artery
14
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