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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1037
total RNA-seq
881
ChIP-seq
174
single cell RNA-seq
87
RNA microarray
27
WGBS
25
pCHi-C
16
Hi-C
16
small RNA-seq
11
RRBS
4
MeRIP-seq
3
snDrop-seq
Assay category
27
DNA methylation
Date released
12
July, 2019
9
August, 2017
6
November, 2018
Available data
17
bam
16
bed bedMethyl
16
bigBed bedMethyl
16
bigWig
10
fastq
Organism
27
Homo sapiens
Biosample type
47
primary cell
27
tissue
1
cell line
Organ
8
heart
6
adipose tissue
6
connective tissue
4
liver
4
pancreas
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
27
AMP
Genome assembly (visualization)
16
GRCh38
Lab
27
AMP-T2D consortium
audit.NOT_COMPLIANT.category!
missing controlled_by
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
27 results
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WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
aorta
2
body of pancreas
2
heart right ventricle
2
pancreas
2
spleen
2
heart
1
muscle of leg
1
right cardiac atrium
1
right lobe of liver
1
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