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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
Assay category
27
DNA binding
Target of assay
620
histone modification
619
histone
320
narrow histone mark
299
broad histone mark
187
control
76
transcription factor
27
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
2
nucleotide modification
Date released
11
October, 2018
5
May, 2024
4
April, 2019
4
May, 2019
2
December, 2017
1
August, 2017
Available data
26
bed narrowPeak
26
bigWig
22
bam
20
bigBed narrowPeak
14
fastq
1
bed bed3+
Organism
27
Homo sapiens
Biosample type
63
cell line
27
tissue
11
in vitro differentiated cells
10
primary cell
Organ
10
heart
7
pancreas
5
adipose tissue
5
connective tissue
3
blood vessel
3
vasculature
2
liver
1
artery
1
kidney
Project
27
AMP
Genome assembly (visualization)
26
GRCh38
21
hg19
Lab
22
AMP-T2D consortium
5
Patrick T. Ellinor, Broad
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
bone element
BIOSAMPLE
ASSAY
27 results
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ChIP-seq
tissue
body of pancreas
5
left cardiac atrium
5
heart left ventricle
3
omental fat pad
3
subcutaneous adipose tissue
2
ascending aorta
1
coronary artery
1
islet of Langerhans
1
kidney
1
liver
1
pancreas
1
right atrium auricular region
1
right lobe of liver
1
thoracic aorta
1
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