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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
total RNA-seq
48
single cell RNA-seq
11
ChIP-seq
8
ATAC-seq
Assay category
168
Transcription
11
DNA binding
8
DNA accessibility
Target of assay
8
histone
8
histone modification
7
broad histone mark
3
control
1
narrow histone mark
Date released
715
February, 2021
399
May, 2021
396
November, 2017
372
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
93
December, 2017
85
November, 2018
80
April, 2019
76
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
176
bam
175
bigWig
164
tsv
63
fastq
10
tagAlign
9
bed narrowPeak
3
bigBed narrowPeak
2
bed broadPeak
Organism
187
Homo sapiens
Biosample type
139
tissue
48
primary cell
Organ
162
pancreas
33
epithelium
12
brain
3
connective tissue
1
adipose tissue
1
spleen
Project
187
AMP
Genome assembly (visualization)
175
GRCh38
174
hg19
Lab
186
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
6
inconsistent ontology term
Audit category:
missing controlled_by
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
187 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
120
1
brain
11
body of pancreas
4
cerebellum (Hemisphere)
1
omental fat pad
1
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primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
pancreatic acinar cell
5
pancreatic delta cell
4
pancreatic cell
3
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