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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
394
ChIP-seq
Assay category
394
DNA binding
Target of assay
235
transcription factor
87
histone
87
histone modification
71
control
66
recombinant protein
50
broad histone mark
37
narrow histone mark
35
RNA binding protein
11
chromatin remodeller
2
other context
other post-translational modification
Date released
715
February, 2021
399
May, 2021
394
November, 2017
372
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
93
December, 2017
82
November, 2018
80
April, 2019
76
October, 2018
63
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
380
bam
322
bigWig
312
fastq
301
bed narrowPeak
300
bigBed narrowPeak
78
tagAlign
69
bed broadPeak
63
bigBed broadPeak
3
tar
Organism
394
Homo sapiens
Biosample type
303
cell line
82
tissue
9
primary cell
Organ
303
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
394
AMP
Genome assembly (visualization)
275
GRCh38
269
hg19
Lab
394
AMP-T2D consortium
Audit category:
missing controlled_by
Audit category:
18
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
organ_slims!
urinary bladder
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
394 results
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Clear Filters
ChIP-seq
cell line
HepG2
303
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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