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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
ChIP-seq
Assay category
72
DNA binding
Target of assay
72
histone
72
histone modification
38
narrow histone mark
34
broad histone mark
30
control
9
transcription factor
8
RNA binding protein
3
nucleotide modification
1
chromatin remodeller
Date released
21
October, 2019
14
August, 2017
14
December, 2017
10
November, 2019
3
August, 2021
3
May, 2019
2
June, 2019
2
May, 2021
2
November, 2017
1
March, 2020
Available data
72
bam
69
bigWig
67
bed narrowPeak
30
fastq
29
bigBed narrowPeak
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
3
bed bed3+
Organism
72
Homo sapiens
Biosample type
45
primary cell
15
in vitro differentiated cells
12
cell line
Organ
183
brain
103
pancreas
102
liver
78
connective tissue
72
epithelium
71
vasculature
70
blood vessel
62
heart
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
11
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
70
AMP
2
T1D
Genome assembly (visualization)
69
hg19
67
GRCh38
Lab
72
AMP-T2D consortium
Audit category:
16
inconsistent ontology term
Audit category:
missing controlled_by
Audit category:
5
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
72 results
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Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein
15
epithelial cell of proximal tubule
7
pancreatic alpha cell
7
pancreatic beta cell
7
hepatocyte
3
+ See 4 more…
in vitro differentiated cells
hepatocyte
12
Hepatic endoderm
2
pancreatic PP cell
1
cell line
EndoC_BH1
12
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