Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
52
histone
52
histone modification
28
narrow histone mark
24
broad histone mark
18
transcription factor
6
chromatin remodeller
3
RNA binding protein
1
recombinant protein
Date released
32
September, 2018
22
August, 2017
10
November, 2017
3
November, 2018
2
October, 2017
1
December, 2017
Available data
72
fastq
71
bam
69
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
10
bed bed3+
4
tagAlign
bed broadPeak
Organism
70
Homo sapiens
Biosample type
44
primary cell
13
cell line
12
tissue
1
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
connective tissue
13
liver
12
adipose tissue
2
brain
1
embryo
Project
70
AMP
Genome assembly (visualization)
67
hg19
60
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
70
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
files.file_type!
bed broadPeak
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
70 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
13
tissue
islet of Langerhans
10
brain
2
in vitro differentiated cells
pancreatic endoderm
1
Download