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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ChIP-seq
Assay category
75
DNA binding
Target of assay
49
histone
49
histone modification
27
narrow histone mark
26
transcription factor
22
broad histone mark
2
chromatin remodeller
1
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
32
September, 2018
November, 2017
3
November, 2018
1
December, 2017
Available data
75
bam
75
fastq
73
bigWig
35
bed narrowPeak
14
bed bed3+
2
bigBed narrowPeak
Organism
75
Homo sapiens
Biosample type
44
primary cell
22
tissue
6
in vitro differentiated cells
3
cell line
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
brain
3
liver
1
embryo
Project
75
AMP
Genome assembly (visualization)
73
GRCh38
73
hg19
Lab
75
AMP-T2D consortium
Audit category:
75
missing controlled_by
Audit category:
2
inconsistent control read length
2
inconsistent control run_type
organ_slims!
brain
month_released!
November, 2017
BIOSAMPLE
ASSAY
75 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
cell line
HepG2
3
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