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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
ChIP-seq
Assay category
58
DNA binding
Target of assay
29
histone
29
histone modification
29
transcription factor
17
narrow histone mark
12
broad histone mark
1
RNA binding protein
1
recombinant protein
Date released
39
August, 2017
11
September, 2018
6
November, 2017
1
December, 2017
1
November, 2018
Available data
58
bam
58
fastq
56
bigWig
18
bed narrowPeak
14
bed bed3+
6
bigBed narrowPeak
Organism
58
Homo sapiens
Biosample type
23
primary cell
22
tissue
7
cell line
6
in vitro differentiated cells
Organ
54
pancreas
epithelium
17
connective tissue
12
adipose tissue
7
liver
brain
1
embryo
Project
58
AMP
Genome assembly (visualization)
56
hg19
51
GRCh38
Lab
58
AMP-T2D consortium
Audit category:
58
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
organ_slims!
brain
epithelium
audit.WARNING.category!
inconsistent control run_type
BIOSAMPLE
ASSAY
58 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
tissue
white adipose tissue
12
islet of Langerhans
10
cell line
HepG2
7
in vitro differentiated cells
adipocyte
5
pancreatic endoderm
1
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