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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
Assay category
56
DNA binding
Target of assay
45
histone
45
histone modification
24
narrow histone mark
21
broad histone mark
11
transcription factor
1
recombinant protein
Date released
32
September, 2018
17
August, 2017
6
November, 2017
1
November, 2018
Available data
56
bam
56
fastq
55
bigWig
38
bed narrowPeak
6
bigBed narrowPeak
Organism
56
Homo sapiens
Biosample type
44
primary cell
tissue
7
cell line
5
in vitro differentiated cells
Organ
44
pancreas
21
epithelium
7
liver
5
connective tissue
embryo
Project
56
AMP
Genome assembly (visualization)
55
hg19
50
GRCh38
Lab
56
AMP-T2D consortium
Audit category:
56
missing controlled_by
Audit category:
inconsistent control run_type
5
inconsistent control read length
organ_slims!
embryo
audit.WARNING.category!
inconsistent control run_type
biosample_type!
tissue
BIOSAMPLE
ASSAY
56 results
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Clear Filters
ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
cell line
HepG2
7
in vitro differentiated cells
adipocyte
5
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