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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ChIP-seq
Assay category
13
DNA binding
Target of assay
346
transcription factor
88
recombinant protein
83
control
59
RNA binding protein
27
histone
27
histone modification
19
chromatin remodeller
14
narrow histone mark
13
broad histone mark
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
6
November, 2019
4
October, 2019
2
November, 2017
1
August, 2021
Available data
12
bam
12
bed narrowPeak
12
bigWig
5
bigBed narrowPeak
2
bed broadPeak
2
bigBed broadPeak
2
fastq
Organism
13
Homo sapiens
Biosample type
300
tissue
122
primary cell
51
in vitro differentiated cells
13
cell line
Organ
10
pancreas
6
epithelium
3
liver
Project
13
AMP
Genome assembly (visualization)
12
hg19
11
GRCh38
Lab
12
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
6
inconsistent ontology term
Audit category:
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
13 results
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ChIP-seq
cell line
EndoC_BH1
6
Panc1
4
HepG2
3
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