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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
Assay category
71
DNA binding
Target of assay
138
histone
138
histone modification
71
broad histone mark
67
narrow histone mark
48
control
18
transcription factor
8
RNA binding protein
2
nucleotide modification
Date released
31
August, 2017
19
October, 2018
17
September, 2018
4
October, 2019
Available data
66
bigWig
63
bam
61
bed narrowPeak
51
fastq
29
bigBed narrowPeak
7
bed broadPeak
7
tagAlign
6
bed bed3+
Organism
68
Homo sapiens
Biosample type
40
tissue
27
primary cell
4
cell line
Organ
71
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
42
liver
40
connective tissue
38
epithelium
34
limb
20
adipose tissue
16
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
71
AMP
Genome assembly (visualization)
66
hg19
62
GRCh38
Lab
71
AMP-T2D consortium
Audit category:
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
audit.ERROR.category!
inconsistent ontology term
BIOSAMPLE
ASSAY
71 results
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ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
7
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
Panc1
4
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