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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
102
ChIP-seq
61
total RNA-seq
46
ATAC-seq
11
DNase-seq
6
single cell RNA-seq
5
Hi-C
2
WGBS
1
FAIRE-seq
1
RRBS
1
pCHi-C
Assay category
102
DNA binding
Target of assay
71
histone
71
histone modification
45
broad histone mark
26
narrow histone mark
22
control
9
transcription factor
5
RNA binding protein
Date released
50
May, 2019
40
October, 2019
6
February, 2021
6
November, 2017
Available data
102
bam
79
bigWig
75
bed narrowPeak
71
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
6
fastq
6
tagAlign
Organism
102
Homo sapiens
Biosample type
73
tissue
23
primary cell
6
cell line
Organ
552
liver
217
brain
217
pancreas
153
connective tissue
134
heart
129
epithelium
102
vasculature
99
blood vessel
73
adipose tissue
66
limb
60
blood
60
bodily fluid
52
kidney
39
musculature of body
35
nerve
34
artery
22
embryo
20
spleen
17
vein
5
eye
4
gonad
4
ovary
1
lymph node
1
pituitary gland
Project
102
AMP
Genome assembly (visualization)
79
hg19
75
GRCh38
Lab
102
AMP-T2D consortium
audit.WARNING.category!
inconsistent assembly
files.file_type!
tagAlign bed3+
BIOSAMPLE
ASSAY
102 results
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Clear Filters
ChIP-seq
tissue
tibial artery
23
ascending aorta
16
thoracic aorta
16
aorta
13
coronary artery
5
primary cell
endothelial cell of umbilical vein
17
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
cell line
smooth muscle cell of the coronary artery
6
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