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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
37
ChIP-seq
2
DNase-seq
Assay category
37
DNA binding
2
DNA accessibility
Target of assay
35
histone
35
histone modification
20
broad histone mark
15
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
187
June, 2019
134
May, 2022
70
November, 2017
39
August, 2017
19
September, 2020
9
November, 2018
9
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
284
fastq
279
bam
269
bigWig
139
bed narrowPeak
89
tsv
83
tagAlign
39
bed broadPeak
39
bigBed narrowPeak
33
bed bed3+
14
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
0
zippedFastqFolder
Organism
34
Homo sapiens
Biosample type
25
tissue
13
primary cell
1
in vitro differentiated cells
Organ
13
musculature of body
11
pancreas
2
connective tissue
1
adipose tissue
Project
39
AMP
Genome assembly (visualization)
39
hg19
17
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
5
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
12
1
in vitro differentiated cells
adipocyte
1
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