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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
145
ChIP-seq
Assay category
145
DNA binding
Target of assay
319
histone
319
histone modification
174
narrow histone mark
145
broad histone mark
68
control
9
transcription factor
Date released
44
May, 2021
43
August, 2017
41
November, 2017
10
October, 2017
7
August, 2021
Available data
405
bigWig
398
bed narrowPeak
376
bam
240
bigBed narrowPeak
145
tagAlign
116
fastq
34
bed broadPeak
15
bigBed broadPeak
12
bed bed3+
Organism
142
Homo sapiens
Biosample type
75
tissue
50
primary cell
14
in vitro differentiated cells
6
cell line
Organ
45
brain
18
liver
12
connective tissue
8
musculature of body
7
pancreas
4
adipose tissue
1
epithelium
Project
101
AMP
44
T1D
Genome assembly (visualization)
100
GRCh38
83
hg19
Lab
101
AMP-T2D consortium
44
Kyle Gaulton, UCSD
Audit category:
3
missing controlled_by
Audit category:
6
inconsistent control read length
inconsistent assembly
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
145 results
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ChIP-seq
tissue
liver
11
brain
10
caudate nucleus
8
layer of hippocampus
8
skeletal muscle tissue
8
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primary cell
monocyte
44
skeletal muscle myoblast
5
hepatocyte
1
in vitro differentiated cells
adipocyte
8
neural progenitor cell
6
cell line
HepG2
6
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