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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
190
total RNA-seq
130
ChIP-seq
100
ATAC-seq
1
pCHi-C
Assay category
190
Transcription
130
DNA binding
100
DNA accessibility
Target of assay
87
histone
87
histone modification
50
narrow histone mark
37
broad histone mark
37
control
6
transcription factor
4
RNA binding protein
Date released
683
February, 2021
400
November, 2017
379
August, 2017
373
May, 2021
341
May, 2020
313
August, 2021
278
October, 2019
198
June, 2019
153
February, 2023
135
July, 2018
120
May, 2022
115
May, 2019
95
July, 2019
88
November, 2018
80
April, 2019
75
December, 2017
74
October, 2018
58
March, 2020
47
September, 2023
45
November, 2019
40
May, 2024
40
September, 2020
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
April, 2018
16
January, 2021
15
May, 2023
12
September, 2018
10
November, 2020
8
January, 2018
6
September, 2017
5
March, 2019
5
March, 2023
4
December, 2019
2
June, 2018
1
August, 2018
1
August, 2022
1
October, 2022
Available data
362
bam
325
bigWig
189
tsv
92
bed narrowPeak
64
bigBed narrowPeak
50
tagAlign
Organism
421
Homo sapiens
Biosample type
273
tissue
147
primary cell
1
cell line
Organ
194
liver
57
heart
23
kidney
Project
376
AMP
45
T1D
Genome assembly (visualization)
325
hg19
271
GRCh38
Lab
376
AMP-T2D consortium
45
Kyle Gaulton, UCSD
Audit category:
8
inconsistent ontology term
audit.WARNING.category!
inconsistent assembly
organ_slims!
epithelium
BIOSAMPLE
ASSAY
421 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
pCHi-C
tissue
liver
143
50
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
primary cell
naive thymus-derived CD4-positive, alpha-beta T cell
1
22
CD4-positive, alpha-beta memory T cell
22
macrophage
11
B cell
2
2
CD8-positive, alpha-beta T cell
2
2
+ See 24 more…
cell line
HepG2
1
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