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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
132
ChIP-seq
Assay category
132
DNA binding
Target of assay
355
transcription factor
135
histone modification
134
histone
132
control
82
recombinant protein
72
narrow histone mark
63
RNA binding protein
62
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
56
November, 2017
23
May, 2020
18
October, 2018
17
August, 2017
13
December, 2017
5
August, 2021
Available data
120
bam
96
fastq
29
tagAlign
13
bigWig
1
bed bed3+
Organism
132
Homo sapiens
Biosample type
70
tissue
60
cell line
1
in vitro differentiated cells
1
primary cell
Organ
108
liver
53
pancreas
35
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
9
artery
8
spleen
7
embryo
6
blood
6
bodily fluid
6
musculature of body
2
vein
1
eye
Project
132
AMP
Genome assembly (visualization)
14
hg19
1
GRCh38
Lab
128
AMP-T2D consortium
4
Bing Ren, UCSD
audit.WARNING.category!
inconsistent assembly
BIOSAMPLE
ASSAY
132 results
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ChIP-seq
tissue
liver
43
subcutaneous adipose tissue
10
omental fat pad
8
subcutaneous abdominal adipose tissue
5
right lobe of liver
3
+ See 1 more…
cell line
HepG2
60
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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