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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
WGBS
37
single cell RNA-seq
27
total RNA-seq
Assay category
DNA accessibility
64
Transcription
41
DNA methylation
Date released
666
February, 2021
385
November, 2017
384
August, 2017
365
May, 2021
281
October, 2019
241
May, 2020
237
August, 2021
168
July, 2018
120
May, 2019
101
May, 2022
100
February, 2023
100
July, 2019
83
December, 2017
80
April, 2019
75
October, 2018
73
November, 2018
60
March, 2020
59
September, 2018
56
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
35
November, 2019
31
June, 2019
30
January, 2019
25
February, 2020
15
October, 2017
14
November, 2020
10
December, 2019
9
April, 2020
6
September, 2017
5
January, 2018
5
March, 2023
4
August, 2018
4
May, 2023
4
October, 2022
3
June, 2018
1
March, 2019
Available data
74
zippedFastqFolder
6
bam
6
fastq
6
txt
Organism
105
Homo sapiens
Biosample type
74
primary cell
31
tissue
Organ
47
pancreas
41
epithelium
20
liver
3
kidney
1
adipose tissue
1
connective tissue
1
musculature of body
Project
74
HPAP
31
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
74
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
6
Kyle Gaulton, UCSD
3
Katalin Susztak, Upenn
2
AMP-T2D consortium
audit.WARNING.category!
inconsistent control read length
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
105 results
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Clear Filters
WGBS
single cell RNA-seq
total RNA-seq
primary cell
Langerhans cell
33
pancreatic alpha cell
25
pancreatic beta cell
16
tissue
liver
20
islet of Langerhans
6
kidney
3
adipose tissue
1
skeletal muscle tissue
1
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