Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
951
histone modification
950
histone
483
narrow histone mark
466
broad histone mark
456
transcription factor
343
control
103
RNA binding protein
88
recombinant protein
20
chromatin remodeller
5
nucleotide modification
5
other context
5
other post-translational modification
Date released
9
November, 2017
6
January, 2019
2
November, 2018
1
August, 2017
1
December, 2017
1
December, 2018
Available data
20
bam
20
bed narrowPeak
20
bigBed narrowPeak
20
bigWig
20
fastq
4
bed broadPeak
4
bigBed broadPeak
Organism
20
Homo sapiens
Biosample type
18
cell line
1
in vitro differentiated cells
1
primary cell
Organ
10
liver
9
blood
9
bodily fluid
1
epithelium
Project
20
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
20
AMP-T2D consortium
Audit category:
inconsistent control
Audit category:
1
missing controlled_by
Audit category:
inconsistent control read length
8
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
audit.ERROR.category!
inconsistent control
BIOSAMPLE
ASSAY
20 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
GM12878
9
HepG2
9
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
Download