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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
14
ATAC-seq
4
single cell RNA-seq
1
pCHi-C
Assay category
30
Transcription
14
DNA accessibility
Date released
715
February, 2021
399
May, 2021
378
November, 2017
356
August, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
82
December, 2017
82
November, 2018
80
April, 2019
75
October, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
41
September, 2018
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
45
fastq
43
bam
43
bigWig
29
tsv
14
bed narrowPeak
14
bigBed narrowPeak
1
bedpe bed3+
1
csv
Organism
45
Homo sapiens
Biosample type
44
primary cell
1
in vitro differentiated cells
Organ
43
epithelium
43
pancreas
1
adipose tissue
1
connective tissue
Project
45
AMP
Genome assembly (visualization)
43
GRCh38
43
hg19
Lab
45
AMP-T2D consortium
Audit category:
missing controlled_by
audit.WARNING.category!
inconsistent control read length
audit.NOT_COMPLIANT.category!
missing controlled_by
BIOSAMPLE
ASSAY
45 results
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Clear Filters
total RNA-seq
ATAC-seq
single cell RNA-seq
pCHi-C
primary cell
pancreatic alpha cell
10
3
2
pancreatic beta cell
10
4
pancreatic ductal cell
4
4
pancreatic acinar cell
2
3
1
pancreatic cell
1
in vitro differentiated cells
white fat cell
1
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