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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
206
DNase-seq
66
ChIP-seq
Assay category
66
DNA binding
Target of assay
47
transcription factor
19
histone
19
histone modification
10
broad histone mark
9
narrow histone mark
7
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
51
November, 2017
13
August, 2017
2
October, 2019
Available data
1522
bam
1294
bigWig
1231
bed narrowPeak
801
fastq
770
bigBed narrowPeak
387
tagAlign
101
bed broadPeak
66
bigBed broadPeak
43
bed bed3+
3
tar
1
tagAlign bed3+
Organism
66
Homo sapiens
Biosample type
45
cell line
21
primary cell
Organ
45
liver
6
brain
6
epithelium
6
vasculature
4
blood vessel
2
vein
Project
66
AMP
Genome assembly (visualization)
66
hg19
51
GRCh38
Lab
66
AMP-T2D consortium
Audit category:
inconsistent control read length
1
inconsistent assembly
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
66 results
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ChIP-seq
cell line
HepG2
45
primary cell
skeletal muscle myoblast
13
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
endothelial cell of umbilical vein
2
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