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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
98
total RNA-seq
34
single cell RNA-seq
6
WGBS
Assay category
132
Transcription
DNA accessibility
6
DNA methylation
Date released
76
February, 2023
38
September, 2020
18
February, 2021
6
May, 2022
Available data
269
bigWig
186
bam
168
bed narrowPeak
138
fastq
112
tsv
93
zippedFastqFolder
84
tagAlign
63
txt
7
hic
5
bedpe bed3+
4
bed bed3+
3
cool
1
bedpe
1
vcf
Organism
138
Homo sapiens
Biosample type
132
primary cell
6
tissue
Organ
65
pancreas
59
epithelium
Project
132
HPAP
6
AMP
Lab
AMP-T2D consortium
132
Klaus Kaestner, Upenn
6
Kyle Gaulton, UCSD
audit.WARNING.category!
inconsistent control read length
lab.title!
AMP-T2D consortium
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
138 results
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total RNA-seq
single cell RNA-seq
WGBS
primary cell
pancreatic alpha cell
42
6
exocrine cell
39
Langerhans cell
34
pancreatic beta cell
11
tissue
islet of Langerhans
6
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