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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1603
ChIP-seq
1236
total RNA-seq
343
ATAC-seq
214
single cell RNA-seq
212
DNase-seq
85
RNA microarray
40
pCHi-C
28
WGBS
26
Hi-C
21
RRBS
18
small RNA-seq
5
FAIRE-seq
5
GRO-seq
3
snDrop-seq
2
Capture-C
2
snATAC-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
DNAme array
1
MPRA
Assay category
18
Transcription
Date released
18
July, 2019
2
August, 2021
Available data
18
bam
18
bigWig
18
tsv
Organism
20
Homo sapiens
Biosample type
16
tissue
2
cell line
2
primary cell
Organ
4
brain
4
pancreas
3
adipose tissue
3
connective tissue
3
liver
2
epithelium
2
musculature of body
1
heart
1
kidney
Project
20
AMP
Genome assembly (visualization)
18
GRCh38
18
hg19
Lab
20
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
Audit category:
2
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
month_released!
December, 2019
BIOSAMPLE
ASSAY
20 results
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small RNA-seq
Capture-C
tissue
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
frontal cortex
1
+ See 9 more…
cell line
EndoC_BH1
2
primary cell
mesenchymal stem cell of adipose
1
skeletal muscle satellite cell
1
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