Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
single cell RNA-seq
18
total RNA-seq
3
ATAC-seq
Assay category
88
Transcription
3
DNA accessibility
Date released
303
November, 2017
271
August, 2017
83
December, 2017
83
November, 2018
76
February, 2023
73
September, 2018
59
October, 2018
50
July, 2018
45
February, 2021
44
April, 2018
41
September, 2020
37
February, 2018
35
December, 2018
30
January, 2019
24
May, 2022
17
October, 2017
11
September, 2017
7
August, 2020
5
January, 2018
4
August, 2018
3
June, 2018
1
March, 2019
Available data
167
bigWig
164
bam
164
tsv
91
fastq
19
zippedFastqFolder
Organism
91
Homo sapiens
Biosample type
89
primary cell
2
tissue
Organ
58
pancreas
52
epithelium
2
connective tissue
Project
50
AMP
41
HPAP
Genome assembly (visualization)
53
GRCh38
50
hg19
Lab
50
AMP-T2D consortium
41
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
91 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
total RNA-seq
ATAC-seq
primary cell
pancreatic alpha cell
7
15
2
Langerhans cell
22
pancreatic beta cell
9
1
1
pancreatic acinar cell
5
pancreatic delta cell
4
+ See 11 more…
tissue
islet of Langerhans
2
See all biosamples
Download