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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
total RNA-seq
88
single cell RNA-seq
80
ChIP-seq
3
ATAC-seq
Assay category
224
Transcription
80
DNA binding
3
DNA accessibility
Target of assay
60
histone
60
histone modification
37
broad histone mark
23
narrow histone mark
14
control
6
transcription factor
4
RNA binding protein
Date released
715
February, 2021
399
May, 2021
395
August, 2017
385
November, 2017
341
May, 2020
319
August, 2021
314
October, 2019
218
June, 2019
205
February, 2023
200
May, 2022
168
July, 2018
120
May, 2019
108
July, 2019
83
December, 2017
83
November, 2018
80
April, 2019
75
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
37
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
243
bam
232
bigWig
164
tsv
91
fastq
65
bed narrowPeak
64
bigBed narrowPeak
19
zippedFastqFolder
Organism
307
Homo sapiens
Biosample type
200
tissue
107
primary cell
Organ
176
pancreas
57
heart
52
epithelium
23
kidney
2
connective tissue
Project
248
AMP
59
HPAP
Genome assembly (visualization)
231
GRCh38
229
hg19
Lab
248
AMP-T2D consortium
59
Klaus Kaestner, Upenn
Audit category:
6
inconsistent ontology term
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
307 results
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Clear Filters
total RNA-seq
single cell RNA-seq
ChIP-seq
ATAC-seq
tissue
islet of Langerhans
120
heart left ventricle
35
kidney
23
heart right ventricle
13
heart
9
primary cell
Langerhans cell
40
pancreatic alpha cell
15
7
2
pancreatic beta cell
1
9
1
pancreatic acinar cell
5
pancreatic delta cell
4
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