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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
385
ChIP-seq
Assay category
385
DNA binding
Target of assay
234
transcription factor
77
histone
77
histone modification
71
control
65
recombinant protein
44
broad histone mark
33
narrow histone mark
32
RNA binding protein
9
chromatin remodeller
2
other context
2
other post-translational modification
Date released
385
November, 2017
280
August, 2017
242
October, 2019
165
May, 2021
120
May, 2019
83
December, 2017
80
April, 2019
73
October, 2018
65
November, 2018
50
May, 2020
43
August, 2021
34
December, 2018
32
September, 2018
31
June, 2019
25
January, 2019
22
February, 2018
15
October, 2017
13
November, 2019
8
February, 2021
6
September, 2017
3
March, 2020
Available data
371
bam
313
bigWig
303
fastq
294
bed narrowPeak
293
bigBed narrowPeak
67
tagAlign
57
bed broadPeak
51
bigBed broadPeak
3
tar
Organism
385
Homo sapiens
Biosample type
294
cell line
82
tissue
9
primary cell
Organ
294
liver
91
brain
6
epithelium
6
vasculature
3
blood vessel
Project
385
AMP
Genome assembly (visualization)
263
GRCh38
260
hg19
Lab
385
AMP-T2D consortium
Audit category:
7
missing controlled_by
Audit category:
inconsistent control read length
4
inconsistent control run_type
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
385 results
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Clear Filters
ChIP-seq
cell line
HepG2
294
tissue
layer of hippocampus
22
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
middle frontal area 46
14
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primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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